Rocker replacement help please!!

[jmedero]

Ok so I tore into it today and have some questions. How does the inner rocker line up? There is a part of the inner rocker that the weather strip goes on right? If so when I line up the rocker to it this way the rocker looks to high. If I lower it where the top of the inner rocker lines up flush with the floor pan then no place to attach weather strip. I took some picks of the diff set ups.. can someone tell me which one is right. Thanks in advance. My bloody knuckles will thank you.